##FastQC	0.10.0
>>Basic Statistics	pass
#Measure	Value	
Filename	lane4_Index7_2.fq	
File type	Conventional base calls	
Encoding	Illumina 1.5	
Total Sequences	21762435	
Filtered Sequences	0	
Sequence length	90	
%GC	49	
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	32.03666887459974	33.0	31.0	34.0	30.0	34.0
2	32.18133310909372	33.0	31.0	34.0	30.0	34.0
3	32.247576661343274	34.0	31.0	34.0	30.0	34.0
4	35.72273392200827	37.0	35.0	37.0	33.0	37.0
5	35.70371858663794	37.0	35.0	37.0	33.0	37.0
6	35.663664337193886	37.0	35.0	37.0	33.0	37.0
7	35.68124017372137	37.0	35.0	37.0	33.0	37.0
8	35.65975737549589	37.0	35.0	37.0	33.0	37.0
9	37.32168431519727	39.0	37.0	39.0	34.0	39.0
10-14	37.525138165834846	39.2	37.2	39.4	33.8	39.4
15-19	38.472299997679485	40.0	38.0	41.0	33.6	41.0
20-24	38.264701252410404	40.0	38.0	41.0	33.4	41.0
25-29	37.947255194558885	40.0	37.6	41.0	32.8	41.0
30-34	37.71697885829412	40.0	37.0	41.0	32.4	41.0
35-39	37.74666857821747	40.0	37.0	41.0	32.2	41.0
40-44	37.39560971003475	39.6	36.4	41.0	31.2	41.0
45-49	36.90754255210872	39.0	35.2	40.6	30.4	41.0
50-54	36.54120315120987	38.8	35.0	40.0	30.0	41.0
55-59	36.214234960380125	38.2	35.0	40.0	29.8	41.0
60-64	35.391133804650075	36.8	34.0	40.0	28.6	41.0
65-69	34.463154440208555	35.6	33.4	39.0	27.6	40.8
70-74	33.484768519699195	35.0	32.8	37.4	26.0	39.8
75-79	32.45616958764035	35.0	32.0	36.2	25.2	38.8
80-84	31.357141422823315	34.2	31.0	35.2	23.0	37.0
85-89	30.104185905667265	34.0	30.4	35.0	13.2	36.0
90	29.003087338342425	34.0	30.0	35.0	2.0	35.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
10	250.0
11	2358.0
12	7322.0
13	14986.0
14	24065.0
15	33408.0
16	41928.0
17	49448.0
18	57317.0
19	66750.0
20	77135.0
21	90117.0
22	104503.0
23	122675.0
24	146322.0
25	173551.0
26	209397.0
27	251658.0
28	306358.0
29	372010.0
30	457053.0
31	570432.0
32	722011.0
33	938995.0
34	1288336.0
35	1867102.0
36	2871375.0
37	4097649.0
38	4468017.0
39	2288950.0
40	40957.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	23.388361642435694	11.843812514546281	9.899356390955331	54.8684694520627
2	20.942694090694193	18.69098591040514	36.72687236878007	23.639447630120593
3	25.519807330271902	21.075163791977225	22.334263333498512	31.070765544252353
4	27.667498861490174	27.099379471920848	19.035875035249443	26.19724663133953
5	29.323326729683547	29.58620535243661	21.626907840029997	19.463560077849845
6	24.477360186319288	32.38198781197163	21.921999890264182	21.218652111444904
7	21.601858250063597	18.688337058764997	37.38703347557152	22.322771215599886
8	21.46895563438768	22.083100460741896	29.33807226854755	27.109871636322875
9	21.447015289805364	20.940706908891972	31.823262574550316	25.789015226752348
10-14	24.529819775924935	26.100804226625545	24.640747205992376	24.728628791457137
15-19	24.903937429615198	25.064881842222732	25.049893255028227	24.981287473133847
20-24	24.66106539425344	25.32336765268398	25.45121922751224	24.564347725550334
25-29	24.4883053753788	25.35740248444488	25.40688331255396	24.747408827622362
30-34	24.56862171932016	25.279469497856404	25.30981118361782	24.842097599205612
35-39	24.574240097005546	25.45402561725102	25.274764045710025	24.69697024003341
40-44	24.535488973203496	25.26478029858843	25.43735161058578	24.762379117622295
45-49	24.483590513454153	25.337227041106974	25.34518323043362	24.83399921500525
50-54	24.504113014035774	25.434081125549675	25.382275110004727	24.67953075040983
55-59	24.51725645036632	25.37779973925615	25.32949661821172	24.775447192165803
60-64	24.44328563697217	25.38327984491582	25.430343978889802	24.743090539222212
65-69	24.461130736934596	25.511787976368232	25.41755375614501	24.60952753055216
70-74	24.535298926248394	25.44150413784994	25.31438695102875	24.708809984872914
75-79	24.527789431374945	25.39992568943836	25.37495483343918	24.69733004574752
80-84	24.474602199697877	25.5389886238075	25.379235903545013	24.607173272949606
85-89	24.585493707309137	25.50997751087695	25.27376603306889	24.63076274874502
90	24.32585974276335	25.5865396240362	25.473539011817437	24.61406162138302
>>END_MODULE
>>Per base GC content	fail
#Base	%GC
1	78.2568310944984
2	44.58214172081479
3	56.590572874524256
4	53.86474549282971
5	48.78688680753339
6	45.69601229776419
7	43.924629465663486
8	48.578827270710555
9	47.23603051655771
10-14	49.258448567382075
15-19	49.885224902749044
20-24	49.22541311980378
25-29	49.235714203001166
30-34	49.41071931852578
35-39	49.27121033703896
40-44	49.297868090825794
45-49	49.3175897284594
50-54	49.1836437644456
55-59	49.292703642532125
60-64	49.186376176194386
65-69	49.070658267486756
70-74	49.24410891112131
75-79	49.22511947712246
80-84	49.08177547264748
85-89	49.21625645605416
90	48.939921364146365
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	13.0
1	8.0
2	4.0
3	4.0
4	5.5
5	10.0
6	11.0
7	17.5
8	33.0
9	55.0
10	69.0
11	96.5
12	160.0
13	235.5
14	375.0
15	631.5
16	1118.0
17	1910.5
18	3339.5
19	5930.0
20	7554.0
21	10241.5
22	17285.0
23	27908.0
24	42333.0
25	62122.0
26	88066.5
27	120555.0
28	156290.0
29	194759.0
30	215668.0
31	236346.5
32	279783.5
33	327780.5
34	379473.0
35	429977.0
36	483359.5
37	543293.5
38	593984.0
39	637292.0
40	660511.0
41	673885.5
42	702493.0
43	729401.0
44	745379.5
45	753226.0
46	753121.5
47	746927.5
48	746135.0
49	747495.0
50	747101.0
51	738623.0
52	728921.0
53	716509.5
54	709946.0
55	710646.5
56	699808.0
57	684164.0
58	662929.0
59	636094.5
60	621766.0
61	605763.5
62	569802.0
63	524363.0
64	471834.0
65	419546.5
66	364800.0
67	307726.0
68	256417.5
69	207548.5
70	182422.0
71	160491.5
72	120335.5
73	86881.0
74	58586.0
75	36410.0
76	21256.5
77	11259.0
78	5184.0
79	2155.0
80	1247.0
81	872.5
82	351.0
83	154.0
84	80.5
85	41.5
86	21.5
87	16.5
88	13.5
89	6.5
90	2.0
91	3.0
92	3.0
93	1.5
94	1.0
95	0.5
96	0.5
97	1.5
98	1.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.01724990792620403
3	0.038217230746467476
4	0.047407378815835635
5	0.05207137896103998
6	0.0049672750314934885
7	0.01989667057018206
8	0.015614061569856497
9	0.013642774808977028
10-14	0.01868173299541159
15-19	0.008631387066750573
20-24	0.004369915406984558
25-29	0.0021642798703362005
30-34	0.004386457673509421
35-39	0.0017507232072146337
40-44	8.510077112234913E-4
45-49	0.003495932325587647
50-54	4.4756021097822925E-4
55-59	0.0031899003948776873
60-64	9.916169766848242E-4
65-69	0.004198059638087373
70-74	0.004320288607409971
75-79	0.008580841252369048
80-84	0.006563603751142738
85-89	0.006554413603073369
90	0.0027846148650185515
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
90	2.1762435E7
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Duplicate Percentage	55.549148779749466
#Duplication Level	Relative count
1	100.0
2	32.19181043801617
3	17.22013231288105
4	10.857439356596187
5	7.495567950879924
6	5.610325593462187
7	4.277467894668569
8	3.4137588100488605
9	2.7986768711895187
10++	32.332338824750295
>>END_MODULE
>>Overrepresented sequences	pass
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
CCAGG	4593125	2.5962195	5.596691	1
GAAGA	4614175	2.5908659	5.0400386	2
CCTGG	4547260	2.5495982	6.104159	1
AAGAA	4649000	2.543823	5.0180798	2
CTTCT	4847470	2.5396135	6.175586	1
CTGGA	4395950	2.4565947	9.616273	1
TCCAG	4335655	2.368935	6.031314	2
CTGCT	4321250	2.3420522	5.44919	1
CTCCT	4346805	2.3034298	8.327255	1
CTGGG	3987615	2.2867439	9.196591	1
CAGGA	3993240	2.2496629	5.7014947	1
CTTCA	4213770	2.2255354	6.2925086	1
CTCCA	4097475	2.1889324	8.863852	1
CCCAG	3933775	2.1740038	7.7398686	1
CAGAA	3845060	2.110919	5.243381	1
CTCTG	3743920	2.029148	6.943556	1
CTGCA	3639905	1.988788	5.2189183	1
CTTCC	3703095	1.9623195	5.12678	1
CTGGC	3354905	1.8810579	5.855265	1
TGGAA	3374100	1.8793063	5.4103456	2
CTGAA	3422615	1.8638686	6.0821524	1
CTTTT	3513640	1.8199414	5.249128	1
CTGAG	3112630	1.7394353	5.4096794	1
CTCAG	3179990	1.7374976	6.666189	1
CTTTG	3180170	1.7040612	5.4099927	1
CTGGT	3001165	1.6636403	5.504415	1
CTTGG	2970770	1.6467916	5.769324	1
CTCCC	2877965	1.5425621	5.6125584	1
>>END_MODULE
